FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008356

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008356
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences913252
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTAGCAT4907.902286E-411.71256359
CTCACGG5600.002341854210.28341
GTCCGCA8400.00756665467.686378
GTTCCAT14354.598377E-46.52117971
CAAAAAT20101.943153E-56.08818151
GTTTCAA15250.00642103755.66429851
CCATATT15450.0076149065.5774922
Produced by FastQC (version 0.11.5)