FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008358

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008358
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences450789
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTGGA3350.00914971513.110811
CCTCTAT3350.00914971513.110811
CCCAAAA5157.056672E-512.7925861
CTCAATG4100.0023893412.4979061
CTTTTAT9001.0699459E-610.5736251
CATCAAT9051.3904132E-48.8974841
Produced by FastQC (version 0.11.5)