FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008363

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008363
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1397430
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAATCT3302.8103126E-517.3484751
CGGGTTA4857.584855E-411.7707485
AATTGTG9250.00217954887.71461155
CTTTCGT11603.1278149E-47.40301281
GGCAAAT17852.4600668E-56.41456271
GTATGGT12500.00553841056.29749631
GTCCAGA13050.0086561936.0320851
CAAAGAT24351.8470728E-65.87781951
CTCAAAA15600.0088075285.5048041
AATCTTT28102.392302E-55.0790155
Produced by FastQC (version 0.11.5)