FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008365

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008365
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1483092
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTTGT8457.694273E-48.571891
CCCAAAC10306.3162815E-47.7355061
TTACCGT15450.00730837285.59888948
TCCACCT18650.00174266865.4114423
ACTGTTT18950.00213019275.32577233
CCCGGCT18300.0077654095.14547631
ATTCTGT21600.00199588885.00595146
Produced by FastQC (version 0.11.5)