FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008368

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008368
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences753403
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCTAGT900.00425793631.1848224
GTTGAAT8609.733576E-710.6545491
CTACAAA6350.0081551878.8397929
CATTGAT12350.00571225026.2779211
Produced by FastQC (version 0.11.5)