FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008374

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008374
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences839953
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTTACG4200.003194701412.0249164
CTCAACG4700.00715196610.793221
GTCAAAT5450.00176674710.6376151
CTTGAAC8205.3026677E-59.7214181
AATCCAA7800.00369671138.323955
TTGGGCA8650.0093533727.50598968
TCAAATT10400.0061122586.94034342
CAACAAT11850.00290651626.6974213
CTTTCTT19005.0834245E-56.10263161
Produced by FastQC (version 0.11.5)