FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008376

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008376
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences841169
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATTG2500.001535055217.1498135
CAGAGTC4000.003511612315.149459145
GCCTTAC3250.00857674413.2417561
CTTAAAC4300.003980773511.6763541
AGTGCAA5950.0041108589.60773855
Produced by FastQC (version 0.11.5)