FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008384

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008384
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences881726
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTTAGCT5150.001210497211.1309197
CTCCGCT7300.0020539598.8820651
GAAAAGT14957.9663075E-46.23195552
CCAGAAT13250.009442185.9809631
CTTTGAA16000.00169069085.8535271
AATTTCC15300.0070019275.62002335
Produced by FastQC (version 0.11.5)