FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008392

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008392
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3812698
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCACGG16750.00387839939.142513145
CTCTCGA12950.00133778766.5184361
CTCCCAT30304.838512E-106.26834731
CTCTGAT26454.5978595E-86.1169381
CTTTGAA65700.05.8888331
CAAGCGA18303.0088238E-45.7659661
CCCACTT20200.00113644025.2236231
CATAGGT19100.0031995835.15616271
Produced by FastQC (version 0.11.5)