FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008402

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008402
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences564920
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGGAC2206.7023636E-419.4013021
GTAGCAC2500.006883690618.566603145
TAGTTAT3100.006843844413.7004157
TCAAAAC6700.00109414719.5160782
CATATCG6100.005455769.2825193
CTTCTAT6900.00137793349.2788841
GTTCCGG8700.00122548798.1767941
Produced by FastQC (version 0.11.5)