FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008409

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008409
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2928314
Sequences flagged as poor quality0
Sequence length100-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAAAAC8400.007467117.69888931
CACACGT12658.4075006E-46.7908027
GTCCATT19952.588813E-66.4832751
AGCACAC20151.4248032E-45.6843755
CACGAAT17000.0035932655.4948931
CTCCAAT18400.00153267555.4673271
CCTCTAT21050.00148147015.12040141
AAATAGC20000.0045636355.01104646
Produced by FastQC (version 0.11.5)