FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008413

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008413
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences966092
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCTAGCG700.001076435641.2724277
CAATAAC9200.00175867377.88419441
CTTCCAT14150.00256352736.1513441
CTTCATT15700.00124285436.0060491
CTTTTGA17350.00408183835.43486831
CTCCGCC20559.463907E-45.2944961
Produced by FastQC (version 0.11.5)