FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008416

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008416
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences536727
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGATTCC4908.951277E-411.5381224
CAGACAT4600.00733568110.7552843
CACATCC5700.0031532899.91966153
CTTTAAT7100.00183141598.9934851
ATCGGCG8200.00672536867.78704261
TTAACAC2750.00147398076.4625406110-114
Produced by FastQC (version 0.11.5)