FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008432

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008432
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1330457
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTCAAA13051.7540828E-57.71259451
AAACGAA15703.984638E-67.25391775
CCAATGC14054.6651287E-57.16365531
CTCCCCG11700.00264237666.75911471
GTTCGGA12350.00465483036.4033721
CTTCAAT17058.466322E-56.3248451
CCGAAAT18001.7822302E-45.9910341
Produced by FastQC (version 0.11.5)