FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008433

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008433
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences596005
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCCCCCT1800.004979791619.6383911
CAAACGT3750.001587978413.1971
ATCTTAC5200.00152249510.8282836
AACTGCC6800.00132951529.3155086
ATCTTGC7500.00323819448.4460616
AAACAAA14700.0054749895.74561936
CTTTTTC25101.3252374E-45.06999161
Produced by FastQC (version 0.11.5)