FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008443

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008443
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1012762
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTCAAC8508.1542536E-48.5213541
GGTTGAT9400.00220375027.70547871
AGATGTA9700.00315805367.42771964
ATCCGCC10200.0048957877.1011281
CTCAAAA14657.322342E-56.92178251
ATATAAG12500.00515791966.3403016
GTTCCAT14300.0029315166.07816841
CATAAAT15450.0069263245.62574771
ATTTGAT15700.008267555.53616571
TTTGATT20050.00430662145.0335782
Produced by FastQC (version 0.11.5)