FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008452

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008452
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1305313
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT4203.303103E-818.7502549
CACACGT3703.834648E-617.414247
ACACGTC3957.1442228E-616.3120738
CCCGAAT7602.5606407E-510.3878481
GCACACG6558.089074E-49.8370526
CAAGCAC12751.3604178E-57.8610693
AGAGCAC8250.00656282587.81002333
GATCAAT9550.00281733867.5152441
AATTTAA17350.0047659645.36423355
Produced by FastQC (version 0.11.5)