FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008453

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008453
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences977148
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAAATC6500.0075402878.9252181
CTATGAA10951.4722302E-58.6093711
CTCATCT8150.0052394588.0080561
CTAAAGA8300.00617168427.86333131
CTATAAA13501.9929686E-46.98315671
CTTATGA10550.00671352876.87368631
CTGAAAG17451.4483323E-56.64915941
CCAGATT13400.00143261016.47780942
CTCTTTT21457.238101E-66.0853761
CTTTCTT24901.336973E-55.53345541
Produced by FastQC (version 0.11.5)