FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008471

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008471
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3672837
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAATT12809.4802695E-46.71954871
CCTCACT14950.00541650225.75319241
CCCAAAT19354.9673545E-45.55621621
CTCAAGT20500.0010774665.2445261
CTTTTAT73150.05.1931441
Produced by FastQC (version 0.11.5)