FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008475

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008475
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9819125
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGCTAG7100.00169615539.0728283
CTCAAAT72850.06.10852961
CCCAAAT58300.05.29388431
CTTAAAT86150.05.1654831
CCTAAAT39252.38324E-85.12027031
CTTTAAT127100.05.08243041
CTTCGAT96150.05.0761461
Produced by FastQC (version 0.11.5)