FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008479

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008479
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2558672
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTTAGT5650.00284233210.0474161
CCCGACC11900.00367552536.55033832
CCCGTGG12650.00685012766.17042351
GTCCTGT15900.00188444815.801751
GTTGAAT20159.783978E-45.28237251
CATTTAT36701.9316212E-75.027131
CTCAAAT21200.00192169755.02074531
CTTTAAT33951.0652966E-65.0163091
Produced by FastQC (version 0.11.5)