FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008488

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008488
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences631242
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT2152.0878379E-523.2616487
CACGTCT2902.0846674E-417.2457059
ACACGTC2952.3754257E-416.9534058
GCACACG4051.6362834E-414.1128886
AGCACAC3900.001970903512.82372955
GAGCACA4604.8017263E-412.426464
AGAGCAC4450.005287776211.2396643
CTCATAA4850.00986294910.3347871
CTTGGCG6350.0069014359.0211411
CCTCGAT7600.00312479038.4795771
GAAATGC8800.00131518718.1189195
Produced by FastQC (version 0.11.5)