FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008494

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008494
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences629148
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTTAAC1800.00470279219.8338571
GTGATAC3550.001068330113.909165
GTCTCGT3700.001332073613.5084671
GAGCATG8500.0097694617.4688689
TTTTTAT16750.00369300865.48035433
Produced by FastQC (version 0.11.5)