FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008497

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008497
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences417471
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAG4450.004756959611.3988131
AAAGATA13602.2736104E-46.90594054
CTTTTTT14550.00352617665.97640231
Produced by FastQC (version 0.11.5)