FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008506

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008506
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1844286
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGAAA14957.1698084E-46.2875481
CCCAGAT15800.00139497975.9492941
CCAACGG15400.00681949875.63429641
CTCCATT17300.0041007055.43345981
CTTTTAA26758.090383E-65.40611651
Produced by FastQC (version 0.11.5)