FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008509

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008509
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences570877
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTTAGC2550.00600521719.010794145
CCCCCCC550.002863769215.62338890-94
CCACCTC4950.001189589813.710815145
GAAAGTT4500.00542591611.2005071
CATGGAT6850.00115461979.4602821
Produced by FastQC (version 0.11.5)