FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008515

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008515
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1595183
Sequences flagged as poor quality0
Sequence length100-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCTAAT5109.935666E-411.3978611
CTCAATT10701.047345E-69.5070931
CCCCCCC1707.657457E-59.402937110-114
CCCGCAT10600.00689987336.8548451
AAGACAA25452.195052E-55.3725394
AATCCGC18750.00192883245.36807165
CTTTGAT29406.958344E-65.19009731
Produced by FastQC (version 0.11.5)