FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008531

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008531
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences494628
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CATCGCA2950.00438596514.65061
CCCTTTT5752.2920284E-411.2745921
CCCGCAA4750.00808349210.6152591
CTTTTCT11703.1896637E-47.387911
Produced by FastQC (version 0.11.5)