FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008534

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008534
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences958113
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTGGGT4250.003561520311.8517796
TAAGCGA4650.00696116710.8328374
TGGGTTT5700.002720943710.0992618
CAGGAAC13903.0485564E-46.7449491
CTTTTAT13550.00168015746.38692861
CAAAAAG19501.1833332E-56.2873041
CTTGCGG15850.00149216475.91512871
Produced by FastQC (version 0.11.5)