FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008535

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008535
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1750778
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCGCT11850.00272066126.74065881
TTAACAT10850.00910470456.66092163
CTCGCCC16956.8044304E-56.42613031
CAAACAC15750.00127600985.9936421
CTCAAAG19805.6735746E-45.5011571
AAGATCC20000.0040513845.058973
Produced by FastQC (version 0.11.5)