FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008540

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008540
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences938401
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AATCGCA7950.00966738610.362442145
CCCGGCT9450.00312071257.43662551
GTTTTGA11050.00183708976.99581151
CATTTTA12250.00570666046.27890065
CATAAAT14900.00647791575.65982061
CTTTTTT39357.625204E-95.1791791
TAAATAT20850.00186792915.0305133
Produced by FastQC (version 0.11.5)