FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008552

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008552
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences481106
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CATTGGG2050.00978429917.4682065
CCCATCT3950.00208238212.7291691
ACTACGT1200.004365486611.9366073
AACATTC5050.001030190711.3456865
CTCAAAA6204.723352E-410.4267731
CTTCTTA6000.00421479449.5771841
CTTTGCT7200.00185847438.978611
CTTTGAT10206.200709E-47.74625161
CCATCAT8500.0083035927.60541061
CTTCTTT15953.3809556E-56.7550671
GCTATGG3700.0099141245.039022435-39
Produced by FastQC (version 0.11.5)