FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008555

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008555
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences835103
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACGTTC5059.6920994E-411.4305175
CGAAGGA8256.2912685E-48.7460788
ATTTAAT10951.49651205E-58.5977671
CGCATCG10951.5647693E-58.56738953
CTCATTT9000.00143783698.0466281
TCAGATT10850.0092240766.65103962
CAATTTT14504.8470657E-46.49279641
CTTTTAT15500.0071867325.60668231
CAGATTT15700.0086067625.51570273
Produced by FastQC (version 0.11.5)