FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008558

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008558
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences954395
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCCAAT4907.196946E-411.8438581
CCCGAAC7351.8741733E-49.8698821
AATTACC8000.0046302348.1188296
GAATTAA8000.0046302348.1188295
GTTCCAA8550.0080238577.6361721
CCAATAA12650.00565693066.995824145
CTTTTAT19758.7854474E-55.8769521
CACAAAA15950.0096688285.4578281
CATCAAA17400.00421632875.4199271
CTTGAAA17800.00550865755.29813051
Produced by FastQC (version 0.11.5)