FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008559

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008559
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1185319
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGACATA8900.00134083238.1043824
GTCCTGT8100.0050006698.0499941
CCAAAAC11703.4238186E-58.0499941
CTTCAAT18204.948597E-77.16537951
CTTCAAG18456.2076106E-77.0682881
GTTCTAT11350.00176807397.02158161
CCAGAAT13350.00134970956.51235531
AATTTAA12650.0057846976.2710285
CACCGAT15208.544238E-46.19637731
Produced by FastQC (version 0.11.5)