FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008575

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008575
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences754480
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGCGC3150.0067762513.7218229
AAGATCC4907.627563E-411.7615625
CCCATAT6200.00530369359.3151831
CTCCAAA8256.2569603E-48.7506271
GATTATG11150.00155385827.10704235
CAAAATC14900.0049155315.8022294
CTTGAAA16650.00264909845.6366651
Produced by FastQC (version 0.11.5)