FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008583

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008583
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences583477
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTTACT2550.001739247116.8315051
CTCCAAA4705.698452E-412.1759831
AAATAAC6951.0151294E-511.2908646
CTCCAAT5450.001966848310.5003881
CCCAAAA5950.00407157569.6180041
AGATGTA3700.00561725445.290289125-129
Produced by FastQC (version 0.11.5)