FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008585

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008585
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences706709
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAGGG2902.0283982E-417.308031
TCAGACC4000.002413814212.4826238
CCAAATA6909.336949E-411.479968145
TCAACCT5009.816394E-411.41268353
CAAGTTT6003.550152E-410.7557041
CCTTAAA5350.001653374210.7221971
Produced by FastQC (version 0.11.5)