FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008587

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008587
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1979403
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAACGTC6050.0043553549.5418959
CCCAAAA19802.77867E-76.9418611
CTCTTAT14655.5774505E-46.41938261
CTCAAGA15700.00128547385.9900611
CTCAAAT15250.00608832535.69244581
CATTAAT19956.608605E-45.439211
CTATCAT19400.00273767075.22052051
CAAAGAC20900.00123104195.19197371
AATTCAG20050.0042522745.03940775
CTTTAAA28852.9817893E-55.01500841
Produced by FastQC (version 0.11.5)