FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008591

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008591
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1212709
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCACAC6250.0061307979.1533545
CGCGCGA1700.0086674017.571832760-64
CAACGAT12607.651744E-46.84637981
CAATCTT15752.078831E-46.3899551
CTATAAT12750.00648977656.2020151
ACAATTT13950.00255749036.15296943
CACAAAA19055.9483402E-56.03775261
CTTTAAA17105.9958786E-45.88548471
CTTCAAT19000.00227922855.2969361
Produced by FastQC (version 0.11.5)