FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008593

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008593
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1688679
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAGT7954.2266943E-49.1028681
TGGAGTG9700.0031035127.44160037
CCACTAT9900.00369507267.30988031
CTCATGT9900.00369507267.30988031
GGTGAAT14700.0040324055.90757561
CTTAAAT15100.0054337675.75108431
AGATAGT15500.00746033855.58856736
CTCATAT15900.0096052745.4617211
CTCAAAG17800.0056758475.28528931
AACAAGG22305.3453527E-45.18000752
Produced by FastQC (version 0.11.5)