FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008599

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008599
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1209403
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCAATT6951.0734996E-410.4300881
CTCGATT4900.0097258310.3555881
GTCTGTG7853.277006E-510.157711
GTTCGAT6600.0085749668.7865591
CTTAAGA7450.00233735178.7570731
CCCAGAT14655.4353534E-46.4324811
CTCAAAA17450.00440320475.40033531
Produced by FastQC (version 0.11.5)