FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008600

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008600
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences631446
Sequences flagged as poor quality0
Sequence length100-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAA8701.2050989E-49.0167371
CTTCGAT6500.0086411988.7771311
CTTCAAG7700.003648448.3354251
CTCCAAA8200.0064258097.8271671
CAAAGAC8250.0067856067.779731
TATTCTG10257.191711E-47.64050347
CTTGAAA11402.6576262E-47.50675731
CTTCCTT11350.0020851996.9115071
TTCTCCT10650.0087747526.68503249
TTTTGCA17000.00399178975.44436937
CTTTTAT17350.0049761525.3434261
CAAAAAG17550.0056931845.28253271
CTTTTTT32604.1292697E-75.25012451
Produced by FastQC (version 0.11.5)