FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008605

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008605
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1768144
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTAACT4850.00939336810.4047661
GTGCAAT12200.00398309766.4999331
TTGAGCC12200.004453736.430827
CTTTCAC17658.671068E-45.71821
TTGGATT16900.0036153865.4917142
CTTCGAC19300.00267982325.2293381
CAGGAAT24453.6774372E-45.0124041
Produced by FastQC (version 0.11.5)