FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008607

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008607
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences689116
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTTAGT2900.003768304414.9901521
CAAGACG4806.2295556E-412.0482378
CTTCGCT4700.007161782610.7907831
TTTGATG11850.00283531826.71284632
Produced by FastQC (version 0.11.5)