FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008620

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008620
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences704126
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTACGT1800.004494228419.9904061
CCGTGTC4050.00546087714.174981145
CCCATGA4400.00460881211.4490521
TGCGGGT4850.00977429610.3476737
CTCAAAT7350.00220579428.8120981
CAAAACT7800.00390551298.273043
CTACAAT8050.0050188598.0458281
CAAAATG11955.065907E-57.7999653
AATATTC13552.3934139E-46.8789365
CTTCATC13050.0011246.6175141
CATAAAA16350.00221494335.7220251
Produced by FastQC (version 0.11.5)