FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008621

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008621
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1790115
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTGAC8200.00569222737.9352391
CTCCAAA22102.7017632E-76.5428821
CCCAGCT12550.00519174856.3369511
CTTAAAG13200.0087666916.0249041
CTTCTAT23403.088876E-55.56144951
CTCAAAA25452.0323494E-55.3975571
Produced by FastQC (version 0.11.5)