FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008624

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008624
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences572744
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAC4150.002877769812.1927361
CTATAAT7200.0017554149.0356871
CATGATC6450.0073789738.9476382
CTTTCTT13152.0275365E-68.2454941
CAAAGAA13954.703981E-67.77263451
CTTTATT11250.00164558637.0679161
TTTATTT18800.00190282265.3721522
CTTTTTT23652.1403808E-45.1959981
Produced by FastQC (version 0.11.5)