FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008631

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008631
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences674208
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AATATTA7650.0045366028.1365735
CTTTCAG9856.31747E-47.7338741
GTTTTTT13400.00233619226.20179031
GAAATAT12450.0075351036.1124123
AAATATT15250.0099672545.44216734
Produced by FastQC (version 0.11.5)