FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008650

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008650
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences486475
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCAGAT8358.284269E-48.5057811
AAATGTT7650.00370151718.3213254
ATATTTG8400.0085727317.578356
TAAATAT11900.00373247346.53818463
Produced by FastQC (version 0.11.5)